原著論文 (* These authors contributed equally, ^‡ Corresponding author(s))

【2026年】

• Naruse Y, Fujii M, Nagai K, Hiruta R, Sakagami T, Kobayashi T, Takahashi K, Iijima J, Suzuki H, Hattori K, Kanai K, Oka Y, Hashimoto Y, Koriyama S, Saito T, Muragaki Y, Kawamata T, Sasayama T, Yasuda J, Uzuki M, Kawaguchi Y, Kawata K, Yamaguchi Y, Go S, Arakawa H, Kaji H, Kitazume S. Cerebrospinal fluid sPTPRZ detected with HNK-1 antibody as a practical biomarker for glioma diagnosis. Neuro Oncol. 2026 Apr doi: 10.1093/noajnl/vdag101.

【2025年】

• Kikuta H, Fujii M, Naruse Y, Nagai K, Hiruta R, Sakagami T, Kobayashi T, Takahashi K, Koriyama S, Saito T, Muragaki Y, Kawamata T, Kawata K, Kitazume S^‡. Analysis of PTPRZ expression in glioma and schwannoma - PTPRZ-long is highly expressed and shed in glioma. Biochem Biophys Res Commun. 2025 Nov 28;791:152925. doi: 10.1016/j.bbrc.2025.152925. Epub 2025 Nov 5. PMID: 41223702.
• Ogura Y*, Sun X*, Zhang Z*, Kawata K*^,‡, Wu J, Matsubara R, Ozeki AN, Taniue K, Onoguchi-Mizutani R, Adachi S, Nakayama K, Goda N, Akimitsu N^‡. Fragile X messenger ribonucleoprotein 1 (FMRP) regulates glycolytic gene expression under chronic hypoxia in HCT116 cells. Sci Rep. 2025 Apr 17;15(1):13273. doi: 10.1038/s41598-025-91828-w. PMID: 40246883; PMCID: PMC12006372.

【2024年】

• Kusano T, Sotani Y, Takeda R, Hatano A, Kawata K, Kano R, Matsumoto M, Kano Y, Hoshino D^‡. Time-series transcriptomics reveals distinctive mRNA expression dynamics associated with gene ontology specificity and protein expression in skeletal muscle after electrical stimulation-induced resistance exercise. FASEB J. 2024 Nov 30;38(22):e70153. doi: 10.1096/fj.202401420RR. PMID: 39545720; PMCID: PMC11698011.

【2023年】

• Kawamura G, Kokaji T, Kawata K, Sekine Y, Suzuki Y, Soga T, Ueda Y, Endo M, Kuroda S^‡, Ozawa T^‡. Optogenetic decoding of Akt2-regulated metabolic signaling pathways in skeletal muscle cells using transomics analysis. Sci Signal. 2023 Feb 21;16(773):eabn0782. doi: 10.1126/scisignal.abn0782. Epub 2023 Feb 21. PMID: 36809024.

【2020年】

• Shirahama S, Onoguchi-Mizutani R, Kawata K, Taniue K, Miki A, Kato A, Kawaguchi Y, Tanaka R, Kaburaki T, Kawashima H, Urade Y, Aihara M, Akimitsu N^‡. Long noncoding RNA U90926 is crucial for herpes simplex virus type 1 proliferation in murine retinal photoreceptor cells. Sci Rep. 2020 Nov 10;10(1):19406. doi: 10.1038/s41598-020-76450-2. PMID: 33173149; PMCID: PMC7656448.
• Hoshino D, Kawata K, Kunida K, Hatano A, Yugi K, Wada T, Fujii M, Sano T, Ito Y, Furuichi Y, Manabe Y, Suzuki Y, Fujii NL, Soga T, Kuroda S^‡. Trans-omic Analysis Reveals ROS-Dependent Pentose Phosphate Pathway Activation after High-Frequency Electrical Stimulation in C2C12 Myotubes. iScience. 2020 Sep 12;23(10):101558. doi: 10.1016/j.isci.2020.101558. PMID: 33083727; PMCID: PMC7522805.
• Kawata K, Wakida H, Yamada T, Taniue K, Han H, Seki M, Suzuki Y, Akimitsu N^‡. Metabolic labeling of RNA using multiple ribonucleoside analogs enables the simultaneous evaluation of RNA synthesis and degradation rates. Genome Res. 2020 Oct;30(10):1481-1491. doi: 10.1101/gr.264408.120. Epub 2020 Aug 25. PMID: 32843354; PMCID: PMC7605267.
• Sun X, Kawata K, Miki A, Wada Y, Nagahama M, Takaya A, Akimitsu N^‡. Exploration of Salmonella effector mutant strains on MTR4 and RRP6 degradation. Biosci Trends. 2020 Sep 21;14(4):255-262. doi: 10.5582/bst.2020.03085. Epub 2020 Apr 30. PMID: 32350160.
• Wakida H*, Kawata K*, Yamaji Y, Hattori E, Tsuchiya T, Wada Y, Ozaki H, Akimitsu N^‡. Stability of RNA sequences derived from the coronavirus genome in human cells. Biochem Biophys Res Commun. 2020 Jul 5;527(4):993-999. doi: 10.1016/j.bbrc.2020.05.008. Epub 2020 May 6. PMID: 32446559; PMCID: PMC7200376.

【2019年】

• Kawata K*, Yugi K*, Hatano A*, Kokaji T, Tomizawa Y, Fujii M, Uda S, Kubota H, Matsumoto M, Nakayama KI, Kuroda S^‡. Reconstruction of global regulatory network from signaling to cellular functions using phosphoproteomic data. Genes Cells. 2019 Jan;24(1):82-93. doi: 10.1111/gtc.12655. Epub 2018 Dec 16. PMID: 30417516.

【2018年】

• Kawata K*, Hatano A*, Yugi K*, Kubota H*, Sano T, Fujii M, Tomizawa Y, Kokaji T, Tanaka KY, Uda S, Suzuki Y, Matsumoto M, Nakayama KI, Saitoh K, Kato K, Ueno A, Ohishi M, Hirayama A, Soga T, Kuroda S^‡. Trans-omic Analysis Reveals Selective Responses to Induced and Basal Insulin across Signaling, Transcriptional, and Metabolic Networks. iScience. 2018 Sep 28;7:212-229. doi: 10.1016/j.isci.2018.07.022. Epub 2018 Sep 10. PMID: 30267682; PMCID: PMC6161632.

【2016年】

• Sano T*, Kawata K*, Ohno S, Yugi K, Kakuda H, Kubota H, Uda S, Fujii M, Kunida K, Hoshino D, Hatano A, Ito Y, Sato M, Suzuki Y, Kuroda S^‡. Selective control of up-regulated and down-regulated genes by temporal patterns and doses of insulin. Sci Signal. 2016 Nov 22;9(455):ra112. doi: 10.1126/scisignal.aaf3739. PMID: 27879394.

【2014年】

• Yugi K, Kubota H, Toyoshima Y, Noguchi R, Kawata K, Komori Y, Uda S, Kunida K, Tomizawa Y, Funato Y, Miki H, Matsumoto M, Nakayama KI, Kashikura K, Endo K, Ikeda K, Soga T, Kuroda S^‡. Reconstruction of insulin signal flow from phosphoproteome and metabolome data. Cell Rep. 2014 Aug 21;8(4):1171-83. doi: 10.1016/j.celrep.2014.07.021. Epub 2014 Aug 14. PMID: 25131207.