Clock Gene in Animal Update: 2009.5.8 Site Map
Clock Gene Homolog
PERIOD CLOCK, NPAS2 ARNTL [BMAL] DEC, (cwo) Id1-4 NF1L3 [E4BP4] (vri)
DBP, (pdp1) NR1D1 [REV-ERB] RORA-C SIRT1-7 CRY, PHR TIM, (timeless)
GSK3 (sgg) CSNK1 CSNK2 BTRC (slmb) FBXL3 FBXL15 (jet)

CLOCK, NPAS2

→ Outlineeng→JPNJPN; → Mutant list

Scientific name Gene GeneID Homologene Blink Protein
Homo sapiens CLOCK 9575 3603 hs_CLOCK NP_004889
NPAS2 4862 1887 hs_NPAS2 NP_002509
Mus musculus Clock 12753 3603 mm_CLOCK NP_031741
Npas2 18143 1887 mm_NPAS2 NP_032745
Gallus gallus CLOCK 373991 3603 gg_CLOCK NP_989505
NPAS2 395433 1887 gg_NPAS2 NP_001025713
LOC422384422384102191gg_LOC422384XP_420353
Xenopus tropicalis clock 100038163 - xt_CLOCK NP_001122127
JGI:330639 JGI:330639 - - 330639.txt
Xenopus laevis clock 399157 - xl_CLOCK NP_001083854
Danio rerio clock 30140 3603 dr_CLOCK NP_571032
npas2 352934 102191 dr_NPAS2 NP_840084
clock3 352927 - dr_CLOCK3 NP_840080
Ciona intestinalis Not found - - - -
Branchiostoma floridae BF_63636 7209356 - bf_CLOCK XP_002201086
Strongylocentrotus purpuratus LOC576191 576191 - sp_CLOCK*P XP_781621
Apis mellifera GB17107 410757 - am_CLOCK XP_394233
Anopheles gambiae AGAP005711 1276380 3603 ag_CLOCK XP_315720
Drosophila melanogaster Clk 38872 3603 dm_CLOCK NP_001014576
Caenorhabditis elegans Not found - - - -
Nematostella vectensis v1g160110 5519866 - nv_CLOCK XP_001639742
Trichoplax adhaerens Not found- - - -
Gallus gallus LOC422384 is not suported by EST, and was excluded from the digested list and the phylogram.

Cladogram of CLOCK
Phylogram of CLOCK
List of CLOCK sequences for ClustalW2 DND file of CLOCK for TreeView

Go to supplementary page of Non-clock PAS family
Cladogram of PAS family
Phylogram of PAS family
List of PAS family sequences  for ClustalW2 DND file of PAS family for TreeView

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